Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat5a

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
Liver
strain
C57BL/6
developmental stage
Lactation day 10
genotype
Wap-Tbrg4 fused
antibody
STAT5A (Santa Cruz Biotechnology, sc-271542)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries for sequencing were prepared using standard Illumina protocols.

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
38370699
Reads aligned (%)
97.5
Duplicates removed (%)
8.7
Number of peaks
918 (qval < 1E-05)

mm9

Number of total reads
38370699
Reads aligned (%)
97.3
Duplicates removed (%)
8.7
Number of peaks
912 (qval < 1E-05)

Base call quality data from DBCLS SRA